Mathee, Kalai
Scholarly & Creative Works
Patents issued
selected scholarly works & creative activities
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Article
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2022Prior exposure to microcystin alters host gut resistome and is associated with dysregulated immune homeostasis in translatable mouse models. SCIENTIFIC REPORTS. 12.Full Text via DOI: 10.1038/s41598-022-15708-3 Web of Science: 000822069800056
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2022Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human ProteinsFull Text via DOI: 10.3390/v14071415 Web of Science: 000831881500001
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2022New dynamic microreactor system to mimic biofilm formation and test anti-biofilm activity of nanoparticles. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 106:2729-2738.Full Text via DOI: 10.1007/s00253-022-11855-9 Web of Science: 000772717500001
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2022Plant-associated Pseudomonas aeruginosa strains harbour multiple virulence traits critical for human infection. JOURNAL OF MEDICAL MICROBIOLOGY. 71.Full Text via DOI: 10.1099/jmm.0.001493 Web of Science: 000862797000011
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2021Multi-Run Concrete Autoencoder to Identify Prognostic lncRNAs for 12 CancersFull Text via DOI: 10.3390/ijms222111919 Web of Science: 000718614700001
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2021Longitudinal assessment of nonavalent vaccine HPV types in a sample of sexually active African American women from ten US Cities. VACCINE. 39:4810-4816.Full Text via DOI: 10.1016/j.vaccine.2021.07.026 Web of Science: 000679483400012
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2021Causal effects in microbiomes using interventional calculus. SCIENTIFIC REPORTS. 11.Full Text via DOI: 10.1038/s41598-021-84905-3 Web of Science: 000629622100021
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2021Dynamic Bayesian Networks for Integrating Multi-omics Time Series Microbiome Data. MSYSTEMS. 6.Full Text via DOI: 10.1128/mSystems.01105-20 Web of Science: 000665831100014
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2021JMM Profile: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). JOURNAL OF MEDICAL MICROBIOLOGY. 70.Full Text via DOI: 10.1099/jmm.0.001336 Web of Science: 000638091300004
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2020Inferring directional relationships in microbial communities using signed Bayesian networks. BMC GENOMICS. 21.Full Text via DOI: 10.1186/s12864-020-07065-0 Web of Science: 000602687200004
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2020Plasmin Cascade Mediates Thrombotic Events in SARS-CoV-2 Infection via Complement and Platelet-Activating SystemsFull Text via DOI: 10.1109/OJEMB.2020.3014798 Web of Science: 000653537500030
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2018Pseudomonas aeruginosa Regulated Intramembrane Proteolysis: Protease MucP Can Overcome Mutations in the AlgO Periplasmic Protease To Restore Alginate Production in Nonmucoid Revertants. JOURNAL OF BACTERIOLOGY. 200.Full Text via DOI: 10.1128/JB.00215-18 Web of Science: 000439777600009
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2018Outer-membrane protein LptD (PA0595) plays a role in the regulation of alginate synthesis in Pseudomonas aeruginosa. JOURNAL OF MEDICAL MICROBIOLOGY. 67:1139-1156.Full Text via DOI: 10.1099/jmm.0.000752 Web of Science: 000440462400017
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2017Quantifying the human vaginal community state types (CSTs) with the species specificity index.. PEERJ. 5:e3366.Full Text via DOI: 10.7717/peerj.3366
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2016Otopathogenic Pseudomonas aeruginosa Enters and Survives Inside MacrophagesFull Text via DOI: 10.3389/fmicb.2016.01828 Web of Science: 000388756100001
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2016Identification of Novel Genomic Islands in Liverpool Epidemic Strain of Pseudomonas aeruginosa Using Segmentation and Clustering. FRONTIERS IN MICROBIOLOGY. 7.Full Text via DOI: 10.3389/fmicb.2016.01210 Web of Science: 000380658100002
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2016Muropeptides in Pseudomonas aeruginosa and their Role as Elicitors of β-Lactam-Antibiotic Resistance. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. 55:6882-6886.Full Text via DOI: 10.1002/anie.201601693 Web of Science: 000377921400013
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2016Characterization of a Carbapenem-Hydrolyzing Enzyme, PoxB, in Pseudomonas aeruginosa PAO1. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. 60:936-945.Full Text via DOI: 10.1128/AAC.01807-15 Web of Science: 000369159800025
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2016Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis. EVOLUTIONARY BIOINFORMATICS. 12:5-16.Full Text via DOI: 10.4137/EBO.S36436 Web of Science: 000382989300002
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2015Microbial "social networks". BMC GENOMICS. 16.Full Text via DOI: 10.1186/1471-2164-16-S11-S6 Web of Science: 000377308500006
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2015Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for α-Ketoglutarate Utilization. PLOS ONE. 10.Full Text via DOI: 10.1371/journal.pone.0129629 Web of Science: 000358147500032
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2014Structural and Functional Characterization of Pseudomonas aeruginosa Global Regulator AmpR. JOURNAL OF BACTERIOLOGY. 196:3890-3902.Full Text via DOI: 10.1128/JB.01997-14 Web of Science: 000343930600009
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2014Role of Pseudomonas aeruginosa AmpR on β-lactam and non-β-lactam transient cross-resistance upon pre-exposure to subinhibitory concentrations of antibiotics. JOURNAL OF MEDICAL MICROBIOLOGY. 63:544-555.Full Text via DOI: 10.1099/jmm.0.070185-0 Web of Science: 000338478600008
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2014Long-Term Organic Nutrient Management Fosters the Eubacterial Community Diversity in the Indian Semi-arid Alfisol as Revealed by Length Heterogeneity-PCR. COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS. 45:189-203.Full Text via DOI: 10.1080/00103624.2013.841919 Web of Science: 000329141400005
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2014LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel open reading frames. JOURNAL OF PROTEOMICS. 96:328-342.Full Text via DOI: 10.1016/j.jprot.2013.11.018 Web of Science: 000331916300026
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2014Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response. NUCLEIC ACIDS RESEARCH. 42:979-998.Full Text via DOI: 10.1093/nar/gkt942 Web of Science: 000331138100031
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2013A dynamic and intricate regulatory network determines Pseudomonas aeruginosa virulence. NUCLEIC ACIDS RESEARCH. 41:1-20.Full Text via DOI: 10.1093/nar/gks1039 Web of Science: 000312889900034
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2012A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production. GENE. 498:242-253.Full Text via DOI: 10.1016/j.gene.2011.11.005 Web of Science: 000302888700014
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2012The Regulatory Repertoire of Pseudomonas aeruginosa AmpC β-Lactamase Regulator AmpR Includes Virulence Genes. PLOS ONE. 7.Full Text via DOI: 10.1371/journal.pone.0034067 Web of Science: 000304523400054
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2011Substituted lactam and cyclic azahemiacetals modulate Pseudomonas aeruginosa quorum sensing. BIOORGANIC & MEDICINAL CHEMISTRY. 19:5500-5506.Full Text via DOI: 10.1016/j.bmc.2011.07.044 Web of Science: 000294711100022
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2011The effect of mucA allele on biofilm architecture and the biofilm-related proteomes. AFRICAN JOURNAL OF BIOTECHNOLOGY. 10:9847-9856.Web of Science: 000298385000018
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2011Paper based point-of-care testing disc for multiplex whole cell bacteria analysis. BIOSENSORS & BIOELECTRONICS. 26:4342-4348.Full Text via DOI: 10.1016/j.bios.2011.04.035 Web of Science: 000293104100014
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2011Characterization of N-acylhomoserine lactone-degrading bacteria associated with the Zingiber officinale (ginger) rhizosphere: Co-existence of quorum quenching and quorum sensing in Acinetobacter and Burkholderia. BMC MICROBIOLOGY. 11.Full Text via DOI: 10.1186/1471-2180-11-51 Web of Science: 000288658900001
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2011Co-regulation of beta-lactam resistance, alginate production and quorum sensing in Pseudomonas aeruginosa. JOURNAL OF MEDICAL MICROBIOLOGY. 60:147-156.Full Text via DOI: 10.1099/jmm.0.021600-0 Web of Science: 000287569700001
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2010Pseudomonas aeruginosa β-lactamase induction requires two permeases, AmpG and AmpP. BMC MICROBIOLOGY. 10.Full Text via DOI: 10.1186/1471-2180-10-328 Web of Science: 000286331600001
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2010Panax ginseng has anti-infective activity against opportunistic pathogen Pseudomonas aeruginosa by inhibiting quorum sensing, a bacterial communication process critical for establishing infection. PHYTOMEDICINE. 17:1040-1046.Full Text via DOI: 10.1016/j.phymed.2010.03.015 Web of Science: 000284860000007
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2010Neurotrophic and neuroimmune responses to early-life Pseudomonas aeruginosa infection in rat lungs. AMERICAN JOURNAL OF PHYSIOLOGY-LUNG CELLULAR AND MOLECULAR PHYSIOLOGY. 299:L334-L344.Full Text via DOI: 10.1152/ajplung.00017.2010 Web of Science: 000281449500005
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2009Impact of Higher Alginate Expression on Deposition of Pseudomonas aeruginosa in Radial Stagnation Point Flow and Reverse Osmosis Systems. ENVIRONMENTAL SCIENCE & TECHNOLOGY. 43:7376-7383.Full Text via DOI: 10.1021/es901095u Web of Science: 000270136500037
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2009A k2A-positive Klebsiella pneumoniae causes liver and brain abscess in a Saint Kitt's man. INTERNATIONAL JOURNAL OF MEDICAL SCIENCES. 6:301-304.Full Text via DOI: 10.7150/ijms.6.301 Web of Science: 000273405400002
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2008Influence of irrigated agriculture on soil microbial diversity. APPLIED SOIL ECOLOGY. 40:146-154.Full Text via DOI: 10.1016/j.apsoil.2008.03.012 Web of Science: 000259414100016
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2008The effect of environmental factors on the electrical conductivity of a single oligo-DNA molecule measured using single-walled carbon nanotube nanoelectrodes. NANOTECHNOLOGY. 19.Full Text via DOI: 10.1088/0957-4484/19/26/265704 Web of Science: 000256455900023
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2008Attenuation of Pseudomonas aeruginosa virulence by medicinal plants in a Caenorhabditis elegans model system. JOURNAL OF MEDICAL MICROBIOLOGY. 57:809-813.Full Text via DOI: 10.1099/jmm.0.47802-0 Web of Science: 000257520100003
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2008Ellagitannins from Conocarpus erectus exhibit anti-quorum sensing activity against Pseudomonas aeruginosa. PLANTA MEDICA. 74.Full Text via DOI: 10.1055/s-0028-1084373
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2008Dynamics of Pseudomonas aeruginosa genome evolution. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 105:3100-3105.Full Text via DOI: 10.1073/pnas.0711982105 Web of Science: 000253567900063
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2008Direct electrical measurements on single-molecule genomic DNA using single-walled carbon nanotubes. NANO LETTERS. 8:26-30.Full Text via DOI: 10.1021/nl0716451 Web of Science: 000252257700005
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2008Inhibition of quorum sensing-controlled virulence factor production in Pseudomonas aeruginosa by south Florida plant extracts. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. 52:198-203.Full Text via DOI: 10.1128/AAC.00612-07 Web of Science: 000252133700020
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2006Microbial metagenome profiling using amplicon length heterogeneity-polymerase chain reaction proves more effective than elemental analysis in discriminating soil specimens. JOURNAL OF FORENSIC SCIENCES. 51:1315-1322.Full Text via DOI: 10.1111/j.1556-4029.2006.00264.x Web of Science: 000242833300010
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2006An assessment of the hypervariable domains of the 16S rRNA genes for their value in determining microbial community diversity: the paradox of traditional ecological indices. FEMS MICROBIOLOGY ECOLOGY. 57:496-503.Full Text via DOI: 10.1111/j.1574-6941.2006.00135.x Web of Science: 000239636200014
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2006Anti-quorum sensing activity of medicinal plants in southern Florida. JOURNAL OF ETHNOPHARMACOLOGY. 105:427-435.Full Text via DOI: 10.1016/j.jep.2005.11.025 Web of Science: 000237885300017
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2006An ecoinformatics tool for microbial community studies: Supervised classification of Amplicon Length Heterogeneity (ALH) profiles of 16S rRNA. JOURNAL OF MICROBIOLOGICAL METHODS. 65:49-62.Full Text via DOI: 10.1016/j.mimet.2005.06.012 Web of Science: 000236814700006
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2006Simple electrospray mass spectrometry detection of acylhomoserine lactones. LUMINESCENCE. 21:1-6.Full Text via DOI: 10.1002/bio.873 Web of Science: 000235695600001
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2005Pseudomonas aeruginosa AmpR is a global transcriptional factor that regulates expression of AmpC and PoxB β-lactamases, proteases, quorum sensing, and other virulence factors. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. 49:4567-4575.Full Text via DOI: 10.1128/AAC.49.11.4567-4575.2005 Web of Science: 000233020900019
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2005Characterization of poxB, a chromosomal-encoded Pseudomonas aeruginosa oxacillinase. GENE. 358:82-92.Full Text via DOI: 10.1016/j.gene.2005.05.027 Web of Science: 000232249500009
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2004Alginate production affects Pseudomonas aeruginosa biofilm development and architecture, but is not essential for biofilm formation. JOURNAL OF MEDICAL MICROBIOLOGY. 53:679-690.Full Text via DOI: 10.1099/jmm.0.45539-0 Web of Science: 000222535400015
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2003Pseudomonas aeruginosa alginate is refractory to Th1 immune response and impedes host immune clearance in a mouse model of acute lung infection. JOURNAL OF MEDICAL MICROBIOLOGY. 52:731-740.Full Text via DOI: 10.1099/jmm.0.05122-0 Web of Science: 000185413800001
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2002Gerimax ginseng regulates both humoral and cellular immunity during chronic Pseudomonas aeruginosa lung infection. JOURNAL OF ALTERNATIVE AND COMPLEMENTARY MEDICINE. 8:459-466.Full Text via DOI: 10.1089/107555302760253658 Web of Science: 000177855600010
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2002Mining protein sequences for motifs. JOURNAL OF COMPUTATIONAL BIOLOGY. 9:707-720.Full Text via DOI: 10.1089/106652702761034145 Web of Science: 000179401200002
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2001Characterization of algG encoding C5-epimerase in the alginate biosynthetic gene cluster of Pseudomonas fluorescens. GENE. 278:107-114.Full Text via DOI: 10.1016/S0378-1119(01)00685-0 Web of Science: 000172537000010
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2001Pseudomonas aeruginosa mutations in lasl and rhll quorum sensing systems result in milder chronic lung infectionFull Text via DOI: 10.1099/00221287-147-5-1105 Web of Science: 000168513600004
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2000Proteome analysis of the effect of mucoid conversion on global protein expression in Pseudomonas aeruginosa strain PAO1 shows induction of the disulfide bond isomerase, DsbA. JOURNAL OF BACTERIOLOGY. 182:6999-7006.Full Text via DOI: 10.1128/JB.182.24.6999-7006.2000 Web of Science: 000167293800018
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2000Detection of N-acylhomoserine lactones in lung tissues of mice infected with Pseudomonas aeruginosaFull Text via DOI: 10.1099/00221287-146-10-2481 Web of Science: 000089985400015
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1997Posttranslational control of the algT (algU)-encoded sigma(22) for expression of the alginate regulon in Pseudomonas aeruginosa and localization of its antagonist proteins MucA and MucB (AlgN). JOURNAL OF BACTERIOLOGY. 179:3711-3720.Full Text via DOI: 10.1128/jb.179.11.3711-3720.1997 Web of Science: A1997XB49100044
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1993THE BACTERIOPHAGE-MU MIDDLE OPERON - ESSENTIAL AND NONESSENTIAL FUNCTIONS. VIROLOGY. 196:712-721.Full Text via DOI: 10.1006/viro.1993.1528 Web of Science: A1993LY07100035
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1993BACTERIOPHAGE-MU MOR PROTEIN REQUIRES SIGMA(70) TO ACTIVATE THE MU-MIDDLE PROMOTER. JOURNAL OF BACTERIOLOGY. 175:5314-5323.Full Text via DOI: 10.1128/JB.175.17.5314-5323.1993 Web of Science: A1993LV38700004
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1990IDENTIFICATION OF A POSITIVE REGULATOR OF THE MU-MIDDLE OPERON. JOURNAL OF BACTERIOLOGY. 172:6641-6650.Full Text via DOI: 10.1128/jb.172.12.6641-6650.1990 Web of Science: A1990EL03400008
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Assessing microbial community diversity using amplicon length heterogeneity polymerase chain reaction. SOIL SCIENCE SOCIETY OF AMERICA JOURNAL. 71:572-578.Full Text via DOI: 10.2136/sssaj2006.0147 Web of Science: 000244980700038
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Book
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1998The anti-sigma factors. Ed. 52.Full Text via DOI: 10.1146/annurev.micro.52.1.231 Web of Science: 000076541000009
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Book Chapter
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2020Effects of Various Alpha-1 Antitrypsin Supplement Dosages on the Lung Microbiome and Metabolome. 90-101.Full Text via DOI: 10.1007/978-3-030-46165-2_8
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2016Microbiome Analysis: State of the Art and Future Trends. 401-424.Full Text via DOI: 10.1002/9781119272182.ch18
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2013Transcriptional Regulatory Network in Pseudomonas aeruginosa. 199-221.Web of Science: 000382950400014
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Conference
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2020So you think you can PLS-DA?. BMC BIOINFORMATICS.Full Text via DOI: 10.1186/s12859-019-3310-7 Web of Science: 000600106400001
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2019BACTERIAL VAGINOSIS AND HIGH-RISK HUMAN PAPILLOMAVIRUS COINFECTION AMONG AFRICAN AMERICAN WOMEN IN THE UNITED STATES. SEXUALLY TRANSMITTED INFECTIONS. A188-A188.Full Text via DOI: 10.1136/sextrans-2019-sti.474 Web of Science: 000506050102129
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2019CO-OCCURRENCE OF BACTERIAL VAGINOSIS AND TRICHOMONAS VAGINALIS AMONG YOUNG AFRICAN AMERICAN WOMEN. SEXUALLY TRANSMITTED INFECTIONS. A188-A188.Full Text via DOI: 10.1136/sextrans-2019-sti.475 Web of Science: 000506050102130
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2019EFFECT OF METRONIDAZOLE TREATMENT ON RECURRENT AND PERSISTENT BACTERIAL VAGINOSIS: A PILOT STUDY. SEXUALLY TRANSMITTED INFECTIONS. A187-A187.Full Text via DOI: 10.1136/sextrans-2019-sti.473 Web of Science: 000506050102128
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2016Anti-bacterial Properties of the Annona montana. HORTSCIENCE. S286-S286.Web of Science: 000536067701214
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2016Panax Ginseng Extracts As a Novel Antibiotic. HORTSCIENCE. S286-S286.Web of Science: 000536067701213
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2014Microbial Associations In The Lungs Differ By Smoking And COPD Status. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE.Web of Science: 000209838200712
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2013A Metagenomic Approach to the Airways Microbiome of Chronic Obstructive Pulmonary Disease (COPD). 2016 32ND SOUTHERN BIOMEDICAL ENGINEERING CONFERENCE (SBEC). 151-+.Full Text via DOI: 10.1109/SBEC.2013.84 Web of Science: 000324751700076
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2013Designing Primers with Higher Taxonomic Distinguishability. 2016 32ND SOUTHERN BIOMEDICAL ENGINEERING CONFERENCE (SBEC). 157-+.Full Text via DOI: 10.1109/SBEC.2013.87 Web of Science: 000324751700079
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2009Computer-assisted bacterial identification using 16S rRNA sequence data. 239-240.Full Text via DOI: 10.1007/978-3-642-01697-4_84
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2008Ellagitannins from Conocarpus erectus exhibit anti-quorum sensing activity against Pseudomonas aeruginosa. PLANTA MEDICA. 1035-1035.Web of Science: 000258261800530
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2008A Functional Network of Yeast Genes Using Gene Ontology Information. 343-+.Full Text via DOI: 10.1109/BIBM.2008.60 Web of Science: 000264284200052
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2007PlasmoTFBM: An intelligent queriable database for predicted transcription factor binding motifs in Plasmodium falciparum. 121-+.Full Text via DOI: 10.1007/978-0-387-34569-7_9 Web of Science: 000243466200009
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2005QUERYING A DATABASE OF REGULATORY ELEMENTS. 81-92.Full Text via DOI: 10.1142/9789812702098_0008
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2005TRAINING SET DESIGN FOR PATTERN DISCOVERY WITH APPLICATIONS TO PROTEIN MOTIF DETECTION. 240-251.Full Text via DOI: 10.1142/9789812702098_0022
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2005Clustering using adaptive self-organizing maps (ASOM) and applications. DISTRIBUTED COMPUTING (DISC 2014). 944-951.Web of Science: 000230023800120
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1996Regulation of the alginate (algD) operon in Pseudomonas aeruginosa. 472-483.Web of Science: A1996BG92N00041
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1995RESTRICTION ENZYME-SYSTEMS OF HELICOBACTER-PYLORI. GASTROENTEROLOGY. A200-A200.Full Text via DOI: 10.1016/0016-5085(95)23460-8 Web of Science: A1995QT86300791
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Other Scholarly Work
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2022Sayonara from the outgoing JMM co-Editors-in-Chief. JOURNAL OF MEDICAL MICROBIOLOGY.Full Text via DOI: 10.1099/jmm.0.001600 Web of Science: 000862797000004
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2021Journal of Medical Microbiology: global footprint and appointment of a regional Editorial Board. JOURNAL OF MEDICAL MICROBIOLOGY.Full Text via DOI: 10.1099/jmm.0.001391 Web of Science: 000662112400002
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2020Composition of the Vaginal Microbiome Associated with High Risk HPV Infection and Increased Risk for Cervical Cancer. CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION. 696-696.Full Text via DOI: 10.1158/1055-9965.EPI-20-0071 Web of Science: 000521288000037
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2020Pseudomonas 2019 meeting report. JOURNAL OF MEDICAL MICROBIOLOGY. 924-927.Full Text via DOI: 10.1099/jmm.0.001208 Web of Science: 000560642600002
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2019DORA Editorial. JOURNAL OF MEDICAL MICROBIOLOGY. 117-118.Full Text via DOI: 10.1099/jmm.0.000887 Web of Science: 000457872000001
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2019DORA Editorial. 125-126.Full Text via DOI: 10.1099/mic.0.000751 Web of Science: 000462254800001
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2019DORA Editorial. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 1-2.Full Text via DOI: 10.1099/ijsem.0.003172 Web of Science: 000455031500001
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2019Dynamic Bayesian networks for integrating multi-omics time-series microbiome dataFull Text via DOI: 10.1101/835124
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2018Outer-membrane protein LptD (PA0595) plays a role in the regulation of alginate synthesis in Pseudomonas aeruginosa (vol 67, pg 1139, 2018). JOURNAL OF MEDICAL MICROBIOLOGY. 1533-1533.Full Text via DOI: 10.1099/jmm.0.000819 Web of Science: 000448922100013
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2018Forensic investigation into the origin of Pseudomonas aeruginosa PA14-old but not lost. JOURNAL OF MEDICAL MICROBIOLOGY. 1019-1021.Full Text via DOI: 10.1099/jmm.0.000778 Web of Science: 000440462400002
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2017Welcome from Norman Fry and Kalai Mathee, new co-Editors-in-Chief for the Journal of Medical Microbiology. JOURNAL OF MEDICAL MICROBIOLOGY. 846-846.Full Text via DOI: 10.1099/jmm.0.000520 Web of Science: 000408243600002
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2016Corrigendum to: Muropeptides in Pseudomonas aeruginosa and their Role as Elicitors of β-Lactam-Antibiotic Resistance (Angew. Chem. Int. Ed., (2016), 55, (6882-6886), 10.1002/anie.201601693). ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. 12568.Full Text via DOI: 10.1002/anie.201608482
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2016Corrigendum: Muropeptides in Pseudomonas aeruginosa and their Role as Elicitors of β-Lactam-Antibiotic Resistance.. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. 12568.Full Text via DOI: 10.1002/anie.201608482
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2016Role of Small RNAs in Pseudomonas Aeruginosa Virulence and Adaptation. 383-392.Full Text via DOI: 10.1002/9781119004813.ch34
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201570th Anniversary Collection for the Microbiology Society: Journal of Medical Microbiology. JOURNAL OF MEDICAL MICROBIOLOGY. 1457-1461.Full Text via DOI: 10.1099/jmm.0.000186 Web of Science: 000369527400001
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2011Co-regulation of beta-lactam resistance, alginate production and quorum sensing in Pseudomonas aeruginosa (vol 60, pg 147, 2011). JOURNAL OF MEDICAL MICROBIOLOGY. 696-697.Full Text via DOI: 10.1099/jmm.0.48605-0 Web of Science: 000290835600025
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2010Neuroimmune Responses to Early-Life Pseudomonas Aeruginosa Infection in Rat Lungs. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE.Web of Science: 000208771004616
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2009Immunomodulatory Effects of Pseudomonas aeruginosa in Rat Airways.. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE.Web of Science: 000208733100768
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2009Selective Blockade of Neurotrophin Pathways Inhibits Neurogenic Inflammation Following Infection with Pseudomonas aeruginosa (PA) in Weanling Rats.. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE.Web of Science: 000208733100767
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Preprint
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2020Causal Inference in Microbiomes Using Intervention CalculusFull Text via DOI: 10.1101/2020.02.28.970624
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Review
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2023Raising awareness of antimicrobial resistance: development of an 'antibiotic footprint calculator'. 1317-1321.Full Text via DOI: 10.1093/jac/dkad113 Web of Science: 000972553400001
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2020The gut microbiome and neuropsychiatric disorders: implications for attention deficit hyperactivity disorder (ADHD). JOURNAL OF MEDICAL MICROBIOLOGY. 14-24.Full Text via DOI: 10.1099/jmm.0.001112 Web of Science: 000518384100003
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2018Microbial otitis media: recent advancements in treatment, current challenges and opportunities. JOURNAL OF MEDICAL MICROBIOLOGY. 1417-1425.Full Text via DOI: 10.1099/jmm.0.000810 Web of Science: 000448922100001
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2018Cell-wall recycling and synthesis in Escherichia coli and Pseudomonas aeruginosa - their role in the development of resistance. JOURNAL OF MEDICAL MICROBIOLOGY. 1-21.Full Text via DOI: 10.1099/jmm.0.000636 Web of Science: 000425273400001
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2015Current concepts in the pathogenesis and treatment of chronic suppurative otitis media. JOURNAL OF MEDICAL MICROBIOLOGY. 1103-1116.Full Text via DOI: 10.1099/jmm.0.000155 Web of Science: 000365460900001
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2015Pseudomonas aeruginosa AmpR: an acute-chronic switch regulator. PATHOGENS AND DISEASE.Full Text via DOI: 10.1111/2049-632X.12208 Web of Science: 000353152200008
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2014Role of innate immunity in the pathogenesis of otitis media. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES. 259-267.Full Text via DOI: 10.1016/j.ijid.2014.10.015 Web of Science: 000348023600058
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2010Beta-lactam antibiotics: from antibiosis to resistance and bacteriology. APMIS. 1-36.Full Text via DOI: 10.1111/j.1600-0463.2009.02563.x Web of Science: 000272770400001
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2009Comparative transcriptome analyses of Pseudomonas aeruginosa.. 349-361.Full Text via DOI: 10.1186/1479-7364-3-4-361
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2003Detection of DNA-binding helix-turn-helix motifs in proteins using the pattern dictionary method. METHODS IN ENZYMOLOGY. 250-264.Web of Science: 000188419300022
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Works By Students
advised honors theses
- Colbert, Brett, Identification of Alginate-regulating Genes in the Clinical Cystic Fibrosis Isolate of Pseudomonas aeruginosa PA2192 2017
- Gonzalez, Victor M., The Role of Ras Oncogene in Differentiation of 3T3-L1 Preadipocytes 2013
- Ramirez, Lourdes, Role of Pseudomonas aeruginosa mifSR Two-Component System in Antibiotic Resistance and Biofilm Formation 2012
- Bosse, Raphael C., Role of Pseudomonas aeruginosa PA4157in Quorum Sensing and Iron Transport Regulation 2009
- Villaseca, Christian, Testing the Efficacy of Panax ginseng Extract as a Novel Anti-Quorum Sensing Agent 2009
- Maricic, Natalie, Investigating an Alternative Treatment to Cystic Fibrosis: Testing the Effect of Panax ginseng C.A. Meyer extracts on Pseudomonas aeruginosa 2008
- Baker, Nabil M. Abou, Presumptive Identification of the Fungal Communities in Cystic Fibrosis Patients' Sputum Using Amplicon Length Heterogeneity Polymerase Chain Reaction 2008
- Jr, Sixto M. Leal, Characterization of L-Serine Deaminase and its Potential Role in the Pathogenicity of Pseudomonas aeruginosa 2006
- Luna, Sergio E., Using a Novel Non-radioactive Method of Primer Extension Analysis to Map the Transcription Start Sites of amp Genes in Pseudomonas aeruginosa 2006
- Gurkar, Aditi, Potential Application of Phage Therapy Against Pseudomonas aeruginosa Biofilm Infection in Cystic Fibrosis Patients 2005
- Olavarrieta, Raquel A., Role of AmpR and alginate production in Pseudomonas aeruginosa biofilm antibiotic resistance associated with cystic fibrosis 2005
- Cumberbatch, Analisa, Characterization of the Anti-Quorum Sensing Activity Exhibited by Marine Macro algae of South Florida 2002
- Ramos, Damaris, Molecular Mechanisms Involved in Regulating the Mucoid-to-Nonmucoid Conversion of Pseudomonas aeruginosa Associated with Cystic Fibrosis Patients 2002
Research
principal investigator on
- Decoding P. aeruginosa RIP cascade and discovering its inhibitors as therapeutics awarded by Allergy and Infectious Diseases 2015 - 2020
- Global Health Consortium, Herbert Wertheim College of Medicine awarded by Sanofi 2016 - 2018
- Alpha Trypsin Deficiency Lung Microbiome Project awarded by Alpha-1 Foundation 2014 - 2017
- BRIDGE Funding 13-14 awarded by FIU Office of Research and Economic Deve 2013 - 2015
- Regulation of P. Aeruginosa PoxB Oxacillinase by AmpR and a Two-Component System awarded by General Medical Sciences 2008 - 2013
- Identifying intermediate transcriptional regulators of the Pseudomonas aeruginosa AmpR virulence regulon awarded by Cystic Fibrosis Foundation 2011
co-principal investigator on
-
Grant
- Microbial DNA in Blood in Alzheimer's Disease Subjects as Potential Biomarkers and the Role of the Microbiome awarded by Florida Department of Health 2023 - 2025
- RAPID: Bioinformatic Search for Epitope-based Molecular Mimicry in the SARS-CoV-2 Virus Using Chameleon awarded by National Science Foundation 2020 - 2022
- Workshop on Health access and policies in Latin American and Caribbean Countries (LACC) awarded by Novartis Latin America Services Inc 2016
- CREST-I/UCRC-Industry Ecosystem to Pipeline Research awarded by National Science Foundation 2012 - 2016
- The Airway Microbiome in Chronic Obstructive Pulmonary Disease awarded by Florida Department of Health 2010 - 2012
- 2007-2008 MBRS Support of Continuous Research Excellence at FIU. awarded by General Medical Sciences 2007 - 2009
subproject principal investigator on
- Geospatial Data and Outreach Facilitation Systems for Vaccination Analysis and Management awarded by Sanofi 2016 - 2017
- CREST-I/UCRC-Industry Ecosystem to Pipeline Research awarded by National Science Foundation 2012 - 2016
- The Airway Microbiome in Chronic Obstructive Pulmonary Disease awarded by Florida Department of Health 2010 - 2012
- 2007-2008 MBRS Support of Continuous Research Excellence at FIU. awarded by General Medical Sciences 2007 - 2009
investigator on
Contact
full name
- Kalai Mathee-Narasimhan
Identifiers
ORCID iD
- https://orcid.org/0000-0003-4569-5419 (confirmed)
visualizations
publication subject areas
- Agriculture
- Biochemistry & Molecular Biology
- Biotechnology & Applied Microbiology
- Chemistry
- Evolutionary Biology
- General & Internal Medicine
- Genetics & Heredity
- Immunology
- Integrative & Complementary Medicine
- Legal Medicine
- Mathematical & Computational Biology
- Microbiology
- Pathology
- Pharmacology & Pharmacy
- Plant Sciences
- Science & Technology - Other Topics
- Virology