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Collins, Timothy
Positions
Professor
,
Biological Sciences
,
College of Arts, Sciences & Education
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Research
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Affiliation
manager of
DNA Core Facility
Facility
Scholarly & Creative Works
selected scholarly works & creative activities
Article
2023
Replacing mechanical protection with colorful faces-twice: parallel evolution of the non-operculate marine worm-snail genera Thylacodes (Guettard, 1770) and Cayo n. gen. (Gastropoda: Vermetidae)
.
PEERJ
. 11.
Full Text via DOI:
10.7717/peerj.15854
Web of Science:
001108701000005
2023
Salmonella enterica
Infection of Synanthropic Non-native Geckos in Southern Florida
Full Text via DOI:
10.1007/s10393-023-01666-3
Web of Science:
001126016800001
2021
Extreme male color polymorphism supports the introduction of multiple native-range Panther Chameleon (Furcifer pardalis) lineages to Florida, USA
Full Text via DOI:
10.17161/randa.v28i2.15599
2021
Provenance and genetic diversity of the non-native geckos
Phelsuma grandis
Gray 1870 and
Gekko gecko
(Linnaeus 1758) in southern Florida, USA
.
BIOLOGICAL INVASIONS
. 23:1649-1662.
Full Text via DOI:
10.1007/s10530-021-02463-1
Web of Science:
000614684500001
2019
Closing the Achievement Gap in a Large Introductory Course by Balancing Reduced In-Person Contact with Increased Course Structure
.
CBE-LIFE SCIENCES EDUCATION
. 18.
Full Text via DOI:
10.1187/cbe.18-08-0153
Web of Science:
000465386400013
2019
A novel and enigmatic two-holed shell aperture in a new species of suspension-feeding worm-snail (Vermetidae)
.
PEERJ
. 7.
Full Text via DOI:
10.7717/peerj.6569
Web of Science:
000460030200016
2019
Multiple Facets of Marine Invertebrate Conservation Genomics
Full Text via DOI:
10.1146/annurev-animal-020518-115034
Web of Science:
000460206800022
2017
Worm-snail Ships Out! Lack of Mobility No Obstacle to Travel
.
NATURAL HISTORY
. 125:10-13.
Web of Science:
000401890000003
2017
A new species of Novastoa Finlay, 1926 (Mollusca: Gastropoda: Vermetidae) from coral reefs of the Pacific Ocean
.
EUROPEAN JOURNAL OF TAXONOMY
. 323:1-11.
Full Text via DOI:
10.5852/ejt.2017.323
Web of Science:
000402414900001
2017
Non-native molluscan colonizers on deliberately placed shipwrecks in the Florida Keys, with description of a new species of potentially invasive worm-snail (Gastropoda: Vermetidae)
.
PEERJ
. 5.
Full Text via DOI:
10.7717/peerj.3158
Web of Science:
000398662500004
2017
A family-level Tree of Life for bivalves based on a Sanger-sequencing approach
.
MOLECULAR PHYLOGENETICS AND EVOLUTION
. 107:191-208.
Full Text via DOI:
10.1016/j.ympev.2016.11.003
Web of Science:
000394200500018
2015
A phylogenetic backbone for Bivalvia: an RNA-seq approach
.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
. 282.
Full Text via DOI:
10.1098/rspb.2014.2332
Web of Science:
000350077000002
2014
Genetic Evidence for Multiple Sources of the Non-Native Fish Cichlasoma urophthalmus (Gunther; Mayan Cichlids) in Southern Florida
.
PLOS ONE
. 9.
Full Text via DOI:
10.1371/journal.pone.0104173
Web of Science:
000341257700009
2014
Investigating the Bivalve Tree of Life - an exemplar-based approach combining molecular and novel morphological characters
.
INVERTEBRATE SYSTEMATICS
. 28:32-115.
Full Text via DOI:
10.1071/IS13010
Web of Science:
000333043200003
2013
Isolation and characterization of 18 novel polymorphic microsatellite markers from the Mayan cichlid (Cichlasoma urophthalmus)
.
CONSERVATION GENETICS RESOURCES
. 5:703-705.
Full Text via DOI:
10.1007/s12686-013-9886-8
Web of Science:
000322619900025
2013
The Ideas Lab Concept, Assembling the Tree of Life, and AVAToL
Full Text via DOI:
10.1371/currents.tol.0fdb85e1619f313a2a5a2ec3d7a8df9e
Web of Science:
000440284100001
2012
Phylogenetic analysis of four nuclear protein-encoding genes largely corroborates the traditional classification of Bivalvia (Mollusca)
.
MOLECULAR PHYLOGENETICS AND EVOLUTION
. 65:64-74.
Full Text via DOI:
10.1016/j.ympev.2012.05.025
Web of Science:
000308061000007
2012
GALAPAGOS AND COCOS ISLANDS: GEOGRAPHICALLY CLOSE, BOTANICALLY DISTANT
.
INTERNATIONAL JOURNAL OF PLANT SCIENCES
. 173:36-53.
Full Text via DOI:
10.1086/662657
Web of Science:
000299022300005
2011
Imported Asian swamp eels (Synbranchidae:
Monopterus
) in North American live food markets: Potential vectors of non-native parasites
.
AQUATIC INVASIONS
. 6:69-76.
Full Text via DOI:
10.3391/ai.2011.6.1.08
Web of Science:
000290839600008
2011
Imported Asian swamp eels (Synbranchidae: Monopterus) in North American live food markets: Potential vectors of non-native parasites
.
AQUATIC INVASIONS
. 6:69-76.
Full Text via DOI:
10.3391/ai.2011.1.08
2010
Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida
.
BIOLOGICAL INVASIONS
. 12:2509-2522.
Full Text via DOI:
10.1007/s10530-009-9660-8
Web of Science:
000279682800013
2010
Sessile snails, dynamic genomes: gene rearrangements within the mitochondrial genome of a family of caenogastropod molluscs
.
BMC GENOMICS
. 11.
Full Text via DOI:
10.1186/1471-2164-11-440
Web of Science:
000282787100004
2008
An Asian orchid, Eulophia graminea (Orchidaceae: Cymbidieae), naturalizes in Florida
Full Text via DOI:
10.15517/lank.v0i0.7946
2008
The role of internal node sequences and the molecular clock in the analysis of serially-sampled data
Full Text via DOI:
10.1504/IJBRA.2008.017167
2007
HIV-1 infection of monocytes is directly related to the success of HAART
.
VIROLOGY
. 369:35-46.
Full Text via DOI:
10.1016/j.virol.2007.07.010
Web of Science:
000251022200004
2007
The identity, distribution, and impacts of non-native apple snails in the continental United States
.
BMC EVOLUTIONARY BIOLOGY
. 7.
Full Text via DOI:
10.1186/1471-2148-7-97
Web of Science:
000248125700001
2007
Molecular systematics of Serrasalmidae: Deciphering the identities of piranha species and unraveling their evolutionary histories
.
ZOOTAXA
. 1-38.
Web of Science:
000246783400001
2005
Phylogeny of sea hares in the Aplysia clade based on mitochondrial DNA sequence data
.
BULLETIN OF MARINE SCIENCE
. 76:691-698.
Web of Science:
000229573700007
2003
Changing identities: tRNA duplication and remolding within animal mitochondrial genomes
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
. 100:15700-15705.
Full Text via DOI:
10.1073/pnas.2535036100
Web of Science:
000187554600075
2002
Genetic diversity in a morphologically conservative invasive taxon: Multiple introductions of swamp eels to the Southeastern United States
.
CONSERVATION BIOLOGY
. 16:1024-1035.
Full Text via DOI:
10.1046/j.1523-1739.2002.01182.x
Web of Science:
000177199500019
2002
Fragmentary taxa, missing data, and ambiguity: mistaken assumptions and conclusions.
.
SYSTEMATIC BIOLOGY
. 51:369-381.
Full Text via DOI:
10.1080/10635150252899824
2001
Phylogenetic and ontogenetic influences on the distribution of anthocyanins and betacyanins in leaves of tropical plants
.
INTERNATIONAL JOURNAL OF PLANT SCIENCES
. 162:1141-1153.
Full Text via DOI:
10.1086/321926
Web of Science:
000170186500013
2001
mtDNA ribosomal gene phylogeny of sea hares in the genus Aplysia (Gastropoda, Opisthobranchia, Anaspidea): Implications for comparative neurobiology
.
SYSTEMATIC BIOLOGY
. 50:676-688.
Full Text via DOI:
10.1080/106351501753328802
Web of Science:
000172149600005
2001
The use of tat and env sequences from human immunodeficiency virus 1 in phylogenetic epidemiological studies
.
ELECTROPHORESIS
. 22:438-444.
Full Text via DOI:
10.1002/1522-2683(200102)22:3<438::AID-ELPS438>3.0.CO;2-0
Web of Science:
000167362400011
1996
Evolutionary History of Northern Hemisphere Nucella (Gastropoda, Muricidae): Molecular, Morphological, Ecological, and Paleontological Evidence
.
EVOLUTION
. 50:2287.
Full Text via DOI:
10.2307/2410698
1996
Associations between physical isolation and geographical variation within three species of Neotropical birds
.
MOLECULAR ECOLOGY
. 5:33-46.
Full Text via DOI:
10.1111/j.1365-294X.1996.tb00289.x
1996
Evolutionary history of northern hemisphere Nucella (Gastropoda, Muricidae): Molecular, morphological, ecological, and paleontological evidence
.
EVOLUTION
. 50:2287-2304.
Full Text via DOI:
10.1111/j.1558-5646.1996.tb03617.x
1995
Deducing the pattern of arthropod phytogeny from mitochondrial DNA rearrangements
.
NATURE
. 376:163-165.
Full Text via DOI:
10.1038/376163a0
1995
Hydrophobicity and phylogeny
.
NATURE
. 373:565-566.
Full Text via DOI:
10.1038/373565b0
1994
Compositional Bias, Character-State Bias, and Character-State Reconstruction Using Parsimony
.
SYSTEMATIC BIOLOGY
. 43:482-496.
Full Text via DOI:
10.1093/sysbio/43.4.482
1994
Compositional effects and weighting of nucleotide sequences for phylogenetic analysis
.
SYSTEMATIC BIOLOGY
. 43:449-459.
Full Text via DOI:
10.1093/sysbio/43.3.449
The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes
.
JOURNAL OF HEREDITY
. 105:1-18.
Full Text via DOI:
10.1093/jhered/est084
Web of Science:
000328427800001
Book
2014
DECONSTRUCTING DENDROPOMA: A SYSTEMATIC REVISION OF A WORLD-WIDE WORM-SNAIL GROUP, WITH DESCRIPTIONS OF NEW GENERA (CAENOGASTROPODA: VERMETIDAE)
. Ed. 57.
Web of Science:
000338092300001
Book Chapter
1998
Beyond area relationships: Extinction and recolonization in molecular marine biogeography
. 297-321.
Full Text via DOI:
10.1007/978-3-0348-8948-3_16
Conference
2006
Reconstructing ancestor-descendant lineages from serially-sampled data: A comparison study
.
DISTRIBUTED COMPUTING (DISC 2014)
. 807-814.
Web of Science:
000238389400108
Letter
2001
A major mitochondrial gene rearrangement among closely related species
.
MOLECULAR BIOLOGY AND EVOLUTION
. 1604-1609.
Full Text via DOI:
10.1093/oxfordjournals.molbev.a003949
Web of Science:
000170275500022
Other Scholarly Work
2017
Corrigendum to: Advancing genomics through the Global Invertebrate Genomics Alliance (GIGA) (Invertebrate Systematics (2017) 31: 1 (1-7) DOI: 10.1071/IS16059)
.
INVERTEBRATE SYSTEMATICS
. 231.
Full Text via DOI:
10.1071/IS16059_CO
2005
Choosing the best genes for the job: The case for stationary genes in genome-scale phylogenetics
.
SYSTEMATIC BIOLOGY
. 493-500.
Full Text via DOI:
10.1080/10635150590947339
Web of Science:
000230302500012
Preprint
2023
Genotypic and phenotypic evidence indicates the introduction of two distinct forms of a non-native species (
Gekko gecko
) to Florida, USA
Full Text via DOI:
10.1101/2023.02.07.527561
Review
2021
Negative impacts of invasive predators used as biological control agents against the pest snail
Lissachatina fulica
: the snail
Euglandina
'
rosea
' and the flatworm
Platydemus manokwari
.
BIOLOGICAL INVASIONS
. 997-1031.
Full Text via DOI:
10.1007/s10530-020-02436-w
Web of Science:
000600269900001
2017
Advancing genomics through the Global Invertebrate Genomics Alliance (GIGA)
.
INVERTEBRATE SYSTEMATICS
. 1-7.
Full Text via DOI:
10.1071/IS16059
Web of Science:
000398469500002
Research
principal investigator on
Platydemus manokwari and Native Snail Surveys in Everglades and Big Cypress
awarded by
National Park Service
2021 - 2024
Tree Snail Status and New Guinea Flatworm Distribution in South Florida
awarded by
U.S. Fish and Wildlife Service
2020 - 2023
The distribution of the New Guinea flatworm Platydemus manokwari in Florida, and the potential impact of this nonnative species on Florida's residents and native species
awarded by
Florida Fish and Wildlife Conservation
2017 - 2018
Collaborative Research: REVSYS: Worm-Snails Revised (Mollusca: Gastropoda).
awarded by
National Science Foundation
2009 - 2015
Collaborative Research: Phylogeny on the Half-Shell -- Assembling the Bivalve Tree of Life
awarded by
National Science Foundation
2007 - 2014
Host Bivalve AToL meeting in Miami
awarded by
National Science Foundation
2011 - 2012
Parasites of Native and Non-Native Apple Sanils in Florida.
awarded by
Florida Fish and Wildlife Conservation
2008 - 2009
Determining the Native Region of the Lobate Lac Scale: A Cooperative Agreement.
awarded by
U.S. Department of Agriculture
2008
Population strucuture of the native apple snail, Pomacea Paludosa, a key indicator species in Florid s aquatic ecosystems: Historical strucuture and anthropogenic effects
awarded by
U.S. Fish and Wildlife Service
2005 - 2008
co-principal investigator on
Grant
TCI-Chesney Graduate Assistant Support
awarded by
Bruce Chesney
2018 - 2020
Identifiers
ORCID iD
https://orcid.org/0000-0001-5720-271X
(confirmed)
visualizations
Co-author Network
Co-investigator Network
Map of Science
publication subject areas
Agriculture
Biochemistry & Molecular Biology
Biodiversity & Conservation
Biotechnology & Applied Microbiology
Education & Educational Research
Environmental Sciences & Ecology
Evolutionary Biology
Genetics & Heredity
Life Sciences & Biomedicine - Other Topics
Marine & Freshwater Biology
Plant Sciences
Science & Technology - Other Topics
Virology
Zoology
Citation index-derived subject areas the researcher has published in