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Collins, Timothy
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Affiliation
manager of
DNA Core Facility
Facility
Scholarly & Creative Works
selected scholarly works & creative activities
Article
2023
Replacing mechanical protection with colorful faces-twice: parallel evolution of the non-operculate marine worm-snail genera Thylacodes (Guettard, 1770) and Cayo n. gen. (Gastropoda: Vermetidae)
.
PEERJ
. 11.
Full Text via DOI:
10.7717/peerj.15854
Web of Science:
001108701000005
2023
Salmonella enterica
Infection of Synanthropic Non-native Geckos in Southern Florida
.
EcoHealth
. 20:227-230.
Full Text via DOI:
10.1007/s10393-023-01666-3
Web of Science:
001126016800001
2021
Extreme male color polymorphism supports the introduction of multiple native-range Panther Chameleon (Furcifer pardalis) lineages to Florida, USA
.
Reptiles & Amphibians
. 28:257-261.
Full Text via DOI:
10.17161/randa.v28i2.15599
2021
Provenance and genetic diversity of the non-native geckos
Phelsuma grandis
Gray 1870 and
Gekko gecko
(Linnaeus 1758) in southern Florida, USA
.
BIOLOGICAL INVASIONS
. 23:1649-1662.
Full Text via DOI:
10.1007/s10530-021-02463-1
Web of Science:
000614684500001
2019
Closing the Achievement Gap in a Large Introductory Course by Balancing Reduced In-Person Contact with Increased Course Structure
.
CBE Life Sciences Education
. 18.
Full Text via DOI:
10.1187/cbe.18-08-0153
Web of Science:
000465386400013
2019
A novel and enigmatic two-holed shell aperture in a new species of suspension-feeding worm-snail (Vermetidae)
.
PEERJ
. 7.
Full Text via DOI:
10.7717/peerj.6569
Web of Science:
000460030200016
2019
Multiple Facets of Marine Invertebrate Conservation Genomics
.
Annual Review of Animal Biosciences
. 7:473-+.
Full Text via DOI:
10.1146/annurev-animal-020518-115034
Web of Science:
000460206800022
2017
Worm-snail Ships Out! Lack of Mobility No Obstacle to Travel
.
NATURAL HISTORY
. 125:10-13.
Web of Science:
000401890000003
2017
A new species of Novastoa Finlay, 1926 (Mollusca: Gastropoda: Vermetidae) from coral reefs of the Pacific Ocean
.
European Journal of Taxonomy
. 323:1-11.
Full Text via DOI:
10.5852/ejt.2017.323
Web of Science:
000402414900001
2017
Non-native molluscan colonizers on deliberately placed shipwrecks in the Florida Keys, with description of a new species of potentially invasive worm-snail (Gastropoda: Vermetidae)
.
PEERJ
. 5.
Full Text via DOI:
10.7717/peerj.3158
Web of Science:
000398662500004
2017
A family-level Tree of Life for bivalves based on a Sanger-sequencing approach
.
MOLECULAR PHYLOGENETICS AND EVOLUTION
. 107:191-208.
Full Text via DOI:
10.1016/j.ympev.2016.11.003
Web of Science:
000394200500018
2015
A phylogenetic backbone for Bivalvia: an RNA-seq approach
.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
. 282.
Full Text via DOI:
10.1098/rspb.2014.2332
Web of Science:
000350077000002
2014
Genetic Evidence for Multiple Sources of the Non-Native Fish
Cichlasoma urophthalmus
(Gunther; Mayan Cichlids) in Southern Florida
.
PLOS ONE
. 9.
Full Text via DOI:
10.1371/journal.pone.0104173
Web of Science:
000341257700009
2014
Investigating the Bivalve Tree of Life - an exemplar-based approach combining molecular and novel morphological characters
.
Invertebrate Systematics
. 28:32-115.
Full Text via DOI:
10.1071/IS13010
Web of Science:
000333043200003
2013
Isolation and characterization of 18 novel polymorphic microsatellite markers from the Mayan cichlid (Cichlasoma urophthalmus)
.
Conservation Genetics Resources
. 5:703-705.
Full Text via DOI:
10.1007/s12686-013-9886-8
Web of Science:
000322619900025
2013
The Ideas Lab Concept, Assembling the Tree of Life, and AVAToL
.
PLoS Currents: Tree of Life
.
Full Text via DOI:
10.1371/currents.tol.0fdb85e1619f313a2a5a2ec3d7a8df9e
Web of Science:
000440284100001
2012
Phylogenetic analysis of four nuclear protein-encoding genes largely corroborates the traditional classification of Bivalvia (Mollusca)
.
MOLECULAR PHYLOGENETICS AND EVOLUTION
. 65:64-74.
Full Text via DOI:
10.1016/j.ympev.2012.05.025
Web of Science:
000308061000007
2012
GALAPAGOS AND COCOS ISLANDS: GEOGRAPHICALLY CLOSE, BOTANICALLY DISTANT
.
INTERNATIONAL JOURNAL OF PLANT SCIENCES
. 173:36-53.
Full Text via DOI:
10.1086/662657
Web of Science:
000299022300005
2011
Imported Asian swamp eels (Synbranchidae:
Monopterus
) in North American live food markets: Potential vectors of non-native parasites
.
Aquatic Invasions
. 6:69-76.
Full Text via DOI:
10.3391/ai.2011.6.1.08
Web of Science:
000290839600008
2011
Imported Asian swamp eels (Synbranchidae: Monopterus) in North American live food markets: Potential vectors of non-native parasites
.
Aquatic Invasions
. 6:69-76.
Full Text via DOI:
10.3391/ai.2011.1.08
2010
Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida
.
BIOLOGICAL INVASIONS
. 12:2509-2522.
Full Text via DOI:
10.1007/s10530-009-9660-8
Web of Science:
000279682800013
2010
Sessile snails, dynamic genomes: gene rearrangements within the mitochondrial genome of a family of caenogastropod molluscs
.
BMC GENOMICS
. 11.
Full Text via DOI:
10.1186/1471-2164-11-440
Web of Science:
000282787100004
2008
An Asian orchid, Eulophia graminea (Orchidaceae: Cymbidieae), naturalizes in Florida
.
Lankesteriana
. 0.
Full Text via DOI:
10.15517/lank.v0i0.7946
2008
The role of internal node sequences and the molecular clock in the analysis of serially-sampled data
.
International Journal of Bioinformatics Research and Applications
. 4:107-121.
Full Text via DOI:
10.1504/IJBRA.2008.017167
2007
HIV-1 infection of monocytes is directly related to the success of HAART
.
VIROLOGY
. 369:35-46.
Full Text via DOI:
10.1016/j.virol.2007.07.010
Web of Science:
000251022200004
2007
The identity, distribution, and impacts of non-native apple snails in the continental United States
.
BMC Evolutionary Biology
. 7.
Full Text via DOI:
10.1186/1471-2148-7-97
Web of Science:
000248125700001
2007
Molecular systematics of Serrasalmidae: Deciphering the identities of piranha species and unraveling their evolutionary histories
.
ZOOTAXA
. 1-38.
Web of Science:
000246783400001
2005
Phylogeny of sea hares in the Aplysia clade based on mitochondrial DNA sequence data
.
BULLETIN OF MARINE SCIENCE
. 76:691-698.
Web of Science:
000229573700007
2003
Changing identities: tRNA duplication and remolding within animal mitochondrial genomes
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
. 100:15700-15705.
Full Text via DOI:
10.1073/pnas.2535036100
Web of Science:
000187554600075
2002
Genetic diversity in a morphologically conservative invasive taxon: Multiple introductions of swamp eels to the Southeastern United States
.
CONSERVATION BIOLOGY
. 16:1024-1035.
Full Text via DOI:
10.1046/j.1523-1739.2002.01182.x
Web of Science:
000177199500019
2002
Fragmentary taxa, missing data, and ambiguity: mistaken assumptions and conclusions.
.
SYSTEMATIC BIOLOGY
. 51:369-381.
Full Text via DOI:
10.1080/10635150252899824
2001
Phylogenetic and ontogenetic influences on the distribution of anthocyanins and betacyanins in leaves of tropical plants
.
INTERNATIONAL JOURNAL OF PLANT SCIENCES
. 162:1141-1153.
Full Text via DOI:
10.1086/321926
Web of Science:
000170186500013
2001
The use of tat and env sequences from human immunodeficiency virus 1 in phylogenetic epidemiological studies
.
ELECTROPHORESIS
. 22:438-444.
Full Text via DOI:
10.1002/1522-2683(200102)22:3<438::AID-ELPS438>3.0.CO;2-0
Web of Science:
000167362400011
1996
Evolutionary History of Northern Hemisphere Nucella (Gastropoda, Muricidae): Molecular, Morphological, Ecological, and Paleontological Evidence
.
Evolution
. 50:2287.
Full Text via DOI:
10.2307/2410698
1996
Associations between physical isolation and geographical variation within three species of Neotropical birds
.
MOLECULAR ECOLOGY
. 5:33-46.
Full Text via DOI:
10.1111/j.1365-294X.1996.tb00289.x
1996
Evolutionary history of northern hemisphere Nucella (Gastropoda, Muricidae): Molecular, morphological, ecological, and paleontological evidence
.
Evolution
. 50:2287-2304.
Full Text via DOI:
10.1111/j.1558-5646.1996.tb03617.x
1995
Deducing the pattern of arthropod phytogeny from mitochondrial DNA rearrangements
.
NATURE
. 376:163-165.
Full Text via DOI:
10.1038/376163a0
1995
Hydrophobicity and phylogeny
.
NATURE
. 373:565-566.
Full Text via DOI:
10.1038/373565b0
1994
Compositional Bias, Character-State Bias, and Character-State Reconstruction Using Parsimony
.
SYSTEMATIC BIOLOGY
. 43:482-496.
Full Text via DOI:
10.1093/sysbio/43.4.482
1994
Compositional effects and weighting of nucleotide sequences for phylogenetic analysis
.
SYSTEMATIC BIOLOGY
. 43:449-459.
Full Text via DOI:
10.1093/sysbio/43.3.449
The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes
.
JOURNAL OF HEREDITY
. 105:1-18.
Full Text via DOI:
10.1093/jhered/est084
Web of Science:
000328427800001
mtDNA ribosomal gene phylogeny of sea hares in the genus
Aplysia
(Gastropoda, Opisthobranchia, Anaspidea):: Implications for comparative neurobiology
.
SYSTEMATIC BIOLOGY
. 50:676-688.
Full Text via DOI:
10.1080/106351501753328802
Web of Science:
000172149600005
Book
2014
DECONSTRUCTING DENDROPOMA: A SYSTEMATIC REVISION OF A WORLD-WIDE WORM-SNAIL GROUP, WITH DESCRIPTIONS OF NEW GENERA (CAENOGASTROPODA: VERMETIDAE)
. Ed. 57.
Web of Science:
000338092300001
Book Chapter
1998
Beyond area relationships: Extinction and recolonization in molecular marine biogeography
. 297-321.
Full Text via DOI:
10.1007/978-3-0348-8948-3_16
Conference
2006
Reconstructing ancestor-descendant lineages from serially-sampled data: A comparison study
.
LECTURE NOTES IN COMPUTER SCIENCE
. 807-814.
Web of Science:
000238389400108
Letter
2001
A major mitochondrial gene rearrangement among closely related species
.
MOLECULAR BIOLOGY AND EVOLUTION
. 1604-1609.
Full Text via DOI:
10.1093/oxfordjournals.molbev.a003949
Web of Science:
000170275500022
Other Scholarly Work
2017
Advancing genomics through the Global Invertebrate Genomics Alliance (GIGA) (vol 31, pg 1, 2017)
.
Invertebrate Systematics
. 231-231.
Full Text via DOI:
10.1071/IS16059_CO
Web of Science:
000400166000008
2005
Choosing the best genes for the job: The case for stationary genes in genome-scale phylogenetics
.
SYSTEMATIC BIOLOGY
. 493-500.
Full Text via DOI:
10.1080/10635150590947339
Web of Science:
000230302500012
Preprint
2023
Genotypic and phenotypic evidence indicates the introduction of two distinct forms of a non-native species (
Gekko gecko
) to Florida, USA
Full Text via DOI:
10.1101/2023.02.07.527561
Review
2021
Negative impacts of invasive predators used as biological control agents against the pest snail
Lissachatina fulica
: the snail
Euglandina
'
rosea
' and the flatworm
Platydemus manokwari
.
BIOLOGICAL INVASIONS
. 997-1031.
Full Text via DOI:
10.1007/s10530-020-02436-w
Web of Science:
000600269900001
2017
Advancing genomics through the Global Invertebrate Genomics Alliance (GIGA)
.
Invertebrate Systematics
. 1-7.
Full Text via DOI:
10.1071/IS16059
Web of Science:
000398469500002
Identifiers
ORCID iD
https://orcid.org/0000-0001-5720-271X
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