Berry, John Graduate Faculty
- Affiliated Member, Institute of Environment , College of Arts, Sciences & Education
Publications
selected scholarly works & creative activities
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Article
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2026NMR-Based toxicometabolomics of Yellowtail Snapper (Ocyurus chrysurus) embryos, as a relevant ecological receptor, exposed to perfluorooctane sulfonate (PFOS). Ecotoxicology. 35:73.Full Text via DOI: 10.1007/s10646-026-03057-0 Web of Science: 001703502400005
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2025Bioconcentration and toxicity of perfluoroalkyl substances (PFAS) in embryonic stages of the ecologically and commercially relevant Olive Flounder (Paralichthys olivaceus), and the zebrafish (Danio rerio) embryo model system. Ecotoxicology. 34:973-987.Full Text via DOI: 10.1007/s10646-025-02891-y Web of Science: 001480158200001
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2024High-Resolution Magic-Angle Spinning Nuclear Magnetic Resonance Identifies Impairment of Metabolism by T-2 Toxin, in Relation to Toxicity, in Zebrafish Embryo Model. Toxins. 16.Full Text via DOI: 10.3390/toxins16100424 Web of Science: 001343289800001
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2024An Integrated Metabolomics-Based Model, and Identification of Potential Biomarkers, of Perfluorooctane Sulfonic Acid Toxicity in Zebrafish Embryos. Environmental Toxicology and Chemistry. 43:896-914.Full Text via DOI: 10.1002/etc.5824 Web of Science: 001173643300001
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2023High-Resolution Magic Angle Spinning (HRMAS) NMR Identifies Oxidative Stress and Impairment of Energy Metabolism by Zearalenone in Embryonic Stages of Zebrafish (Danio rerio), Olive Flounder (Paralichthys olivaceus) and Yellowtail Snapper (Ocyurus chrysurus). Toxins. 15.Full Text via DOI: 10.3390/toxins15060397 Web of Science: 001018002100001
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2022Toxicity of perfluoroalkyl substances (PFAS) toward embryonic stages of mahi-mahi (Coryphaena hippurus). Ecotoxicology. 31:1057-1067.Full Text via DOI: 10.1007/s10646-022-02576-w Web of Science: 000847126800001
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2022An integrated systems-level model of ochratoxin A toxicity in the zebrafish (Danio rerio) embryo based on NMR metabolic profiling. Scientific Reports. 12.Full Text via DOI: 10.1038/s41598-022-09726-4 Web of Science: 000782844000062
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2022Identification of apparently neurotoxic metabolites from assemblages of marine filamentous cyanobacteria associated with the intoxication of captive bottlenose dolphins (Tursiops truncatus) in the Florida Keys. Chemosphere. 288.Full Text via DOI: 10.1016/j.chemosphere.2021.132423 Web of Science: 000710155300002
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2022An integrated systems-level model of the toxicity of brevetoxin based on high-resolution magic-angle spinning nuclear magnetic resonance (HRMAS NMR) metabolic profiling of zebrafish embryos. Science of the Total Environment. 803.Full Text via DOI: 10.1016/j.scitotenv.2021.149858 Web of Science: 000701790300015
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2020Comparative toxicometabolomics of perfluorooctanoic acid (PFOA) and next-generation perfluoroalkyl substances. Environmental Pollution. 265.Full Text via DOI: 10.1016/j.envpol.2020.114928 Web of Science: 000607212800029
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2020Eudesmacarbonate, a Eudesmane-Type Sesquiterpene from a Marine Filamentous Cyanobacterial Mat (Oscillatoriales) in the Florida Keys. Journal of natural products. 83:2030-2035.Full Text via DOI: 10.1021/acs.jnatprod.0c00203 Web of Science: 000545691700032
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2019NMR-Based Metabolic Profiles of Intact Zebrafish Embryos Exposed to Aflatoxin B1 Recapitulates Hepatotoxicity and Supports Possible Neurotoxicity. Toxins. 11.Full Text via DOI: 10.3390/toxins11050258 Web of Science: 000472672300021
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2018High Incidence and Levels of Ochratoxin A in Wines Sourced from the United States. Toxins. 10.Full Text via DOI: 10.3390/toxins10010001 Web of Science: 000424096500001
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2017Metabolic profiling of zebrafish (Danio rerio) embryos by NMR spectroscopy reveals multifaceted toxicity of β-methylamino-L-alanine (BMAA). Scientific Reports. 7.Full Text via DOI: 10.1038/s41598-017-17409-8 Web of Science: 000417570500024
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2017β-Cyclodextrin Attenuates Perfluorooctanoic Acid Toxicity in the Zebrafish Embryo Model. Toxics. 5.Full Text via DOI: 10.3390/toxics5040031 Web of Science: 000419073100009
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2017Carotenoid glycosides from cyanobacteria are teratogenic in the zebrafish (Danio rerio) embryo model. Chemosphere. 174:478-489.Full Text via DOI: 10.1016/j.chemosphere.2017.01.145 Web of Science: 000397076000052
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2016High-Resolution Magic Angle Spinning Nuclear Magnetic Resonance of Intact Zebrafish Embryos Detects Metabolic Changes Following Exposure to Teratogenic Polymethoxyalkenes from Algae. Zebrafish. 13:456-+.Full Text via DOI: 10.1089/zeb.2016.1280 Web of Science: 000383670300011
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2016Teratogenicity of Ochratoxin A and the Degradation Product, Ochratoxin a, in the Zebrafish (Danio rerio) Embryo Model of Vertebrate Development. Toxins. 8.Full Text via DOI: 10.3390/toxins8020040 Web of Science: 000371831200001
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2016A rapid method for separation and identification of microcystins using capillary electrophoresis and time-of-flight mass spectrometry. Journal of Chromatography A. 1431:205-214.Full Text via DOI: 10.1016/j.chroma.2015.11.034 Web of Science: 000369196700023
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2015Identification of teratogenic polymethoxy-1-alkenes from Cylindrospermopsis raciborskii, and taxonomically diverse freshwater cyanobacteria and green algae. Harmful Algae. 49:156-161.Full Text via DOI: 10.1016/j.hal.2015.09.010 Web of Science: 000365058400015
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2014Indole Alkaloids from Fischerella Inhibit Vertebrate Development in the Zebrafish (Danio rerio) Embryo Model. Toxins. 6:3568-3581.Full Text via DOI: 10.3390/toxins6123568 Web of Science: 000346794900019
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2012Polymethoxy-1-alkenes from Aphanizomenon ovalisporum Inhibit Vertebrate Development in the Zebrafish (Danio rerio) Embryo Model. Marine Drugs. 10:2322-2336.Full Text via DOI: 10.3390/md10102322 Web of Science: 000310453600014
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2012Effects of Cyanobacterial Lipopolysaccharides from Microcystis on Glutathione-Based Detoxification Pathways in the Zebrafish (Danio rerio) Embryo. Toxins. 4:390-404.Full Text via DOI: 10.3390/toxins4060390 Web of Science: 000307982900001
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2012Apparent bioaccumulation of cylindrospermopsin and paralytic shellfish toxins by finfish in Lake Catemaco (Veracruz, Mexico). Food Additives and Contaminants - Part A Chemistry, Analysis, Control, Exposure and Risk Assessment. 29:314-321.Full Text via DOI: 10.1080/19440049.2011.597785 Web of Science: 000301935100017
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2012Detection of total microcystin in fish tissues based on lemieux oxidation and recovery of 2-methyl-3-methoxy-4-phenylbutanoic acid (MMPB) by solid-phase microextraction gas chromatography-mass spectrometry (SPME-GC/MS). International Journal of Environmental Analytical Chemistry. 92:1443-1456.Full Text via DOI: 10.1080/03067319.2011.620703 Web of Science: 000309129800010
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2011Cyanobacterial LPS Potentiates Cadmium Toxicity in Zebrafish (Danio rerio) Embryos. Environmental Toxicology. 26:498-505.Full Text via DOI: 10.1002/tox.20578 Web of Science: 000295035600008
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2011BIOACCUMULATION OF MICROCYSTINS BY FISH ASSOCIATED WITH A PERSISTENT CYANOBACTERIAL BLOOM IN LAGO DE PATZCUARO (MICHOACAN, MEXICO). Environmental Toxicology and Chemistry. 30:1621-1628.Full Text via DOI: 10.1002/etc.548 Web of Science: 000292004400017
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2011Cyanobacterial Microcystis aeruginosa Lipopolysaccharide Elicits Release of Superoxide Anion, Thromboxane B2, Cytokines, Chemokines, and Matrix Metalloproteinase-9 by Rat Microglia. Toxicological Sciences. 121:63-72.Full Text via DOI: 10.1093/toxsci/kfr045 Web of Science: 000289807200007
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2010First evidence of "paralytic shellfish toxins" and cylindrospermopsin in a Mexican freshwater system, Lago Catemaco, and apparent bioaccumulation of the toxins in "tegogolo" snails (Pomacea patula catemacensis). Toxicon. 55:930-938.Full Text via DOI: 10.1016/j.toxicon.2009.07.035 Web of Science: 000276436400004
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2009Toxicity of cylindrospermopsin, and other apparent metabolites from Cylindrospermopsis raciborskii and Aphanizomenon ovalisporum, to the zebrafish (Danio rerio) embryo. Toxicon. 53:289-299.Full Text via DOI: 10.1016/j.toxicon.2008.11.016 Web of Science: 000263382200012
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2008Evaluation of the human health threat associated with the hepatotoxin microcystin in the muscle and liver tissues of yellow perch (Perca flavescens). Canadian Journal of Fisheries and Aquatic Sciences. 65:1487-1497.Full Text via DOI: 10.1139/F08-067 Web of Science: 000257359100022
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2008Allelopathic activity among Cyanobacteria and microalgae isolated from Florida freshwater habitats. FEMS Microbiology Ecology. 64:55-64.Full Text via DOI: 10.1111/j.1574-6941.2008.00439.x Web of Science: 000253886700006
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2007Structures of pahayokolides A and B, cyclic peptides from a Lyngbya sp.. Journal of natural products. 70:730-735.Full Text via DOI: 10.1021/np060389p Web of Science: 000246764300002
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2007The zebrafish (Danio rerio) embryo as a model system for identification and characterization of developmental toxins from marine and freshwater microalgae. Comparative Biochemistry and Physiology, Part C. 145:61-72.Full Text via DOI: 10.1016/j.cbpc.2006.07.011 Web of Science: 000244907400008
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2006Antioxidant activity and inhibition of human cancer cells by the herbal product, ARCOMIG. Journal of Medical Sciences. 6:229-234.Full Text via DOI: 10.3923/jms.2006.229.234
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2004Pharmacology and toxicology of pahayokolide A, a bioactive metabolite from a freshwater species of Lyngbya isolated from the Florida Everglades. Comparative Biochemistry and Physiology, Part C. 139:231-238.Full Text via DOI: 10.1016/j.cca.2004.11.005 Web of Science: 000227120600008
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2004Identification of a p53-dependent pathway in the induction of apoptosis of human breast cancer cells by the natural product, resveratrol. Journal of Alternative and Complementary Medicine. 10:235-239.Full Text via DOI: 10.1089/107555304323062211 Web of Science: 000221002100005
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2002Are Pfiesteria species toxicogenic? Evidence against production of ichthyotoxins by Pfiesteria shumwayae. Proceedings of the National Academy of Sciences of the United States of America. 99:10970-10975.Full Text via DOI: 10.1073/pnas.172221699 Web of Science: 000177606900007
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Book Chapter
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2011Marine and Freshwater Microalgae as a Potential Source of Novel Herbicides. 705-734.Web of Science: 000378913300036
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Conference
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2013Purification and characterization of indole alkaloids from the freshwater cyanobacterium, Fischerella 52-1, as inhibitors of development in the zebrafish (Danio rerio) embryo model. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY.Web of Science: 000323851302705
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2003Towards Fourier Interferometry Fluorescence Excitation/Emission Imaging of Malignant Cells combined with Photoacoustic Microscopy. Optics InfoBase Conference Papers. 322-332.
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2003Towards Fourier interferometry fluorescence excitation/emission imaging of malignant cells combined with photoacoustic microscopy. Proceedings of SPIE - The International Society for Optical Engineering. 322-332.Full Text via DOI: 10.1117/12.500999 Web of Science: 000186668500038
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2002Is Pfiesteria toxigenic? Chemical and molecular evidence against polyketide and non-ribosomal peptide toxin production by Pfiesteria shumwayae.. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY. B232-B232.Web of Science: 000176296801295
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2002Fluorescence Imaging of Mitochondrial Localization and Metabolism in Malignant Cells. Optics InfoBase Conference Papers. 562-564.
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2002Fluorescence Imaging of Mitochondrial Localization and Metabolism in Malignant Cells. tud22.Full Text via DOI: 10.1364/bio.2002.tud22
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2002Fluorescence imaging of mitochondrial responses to glucose challenge and probes in mitochondrial DNA-deficient osteosarcoma cells. Microscopy and Microanalysis. 950-951.Full Text via DOI: 10.1017/s1431927602107434
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2001Fourier interferometry with spectral fluorescence imaging for the study of mitochondrial distribution and function in living normal/malignant cells. Proceedings of SPIE - The International Society for Optical Engineering. 165-182.Full Text via DOI: 10.1117/12.446674 Web of Science: 000174363800022
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2001Fourier interferometry/spectral imaging of response to metabolic challenges in perinuclear mitochondria of normal and malignant cells. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 3143-3146.Web of Science: 000178871900865
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Other Scholarly Work
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2009Effect of Microcystis aeruginosa Lipopolysaccharide (LPS) on Neonatal Rat Brain Microglia Cytokine and Chemokine release. The FASEB Journal.Web of Science: 000208621500739
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Preprint
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Review
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2016Indole Alkaloids of the Stigonematales (Cyanophyta): Chemical Diversity, Biosynthesis and Biological Activity. Marine Drugs.Full Text via DOI: 10.3390/md14040073 Web of Science: 000374588000012
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2008Cyanobacterial toxins as allelochemicals with potential applications as algaecides, herbicides and insecticides. Marine Drugs. 117-146.Full Text via DOI: 10.3390/md20080007 Web of Science: 000257202100004
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2008Cyanobacterial toxins as allelochemicals with potential applications as algaecides, herbicides and insecticides. Marine Drugs. 117-146.Full Text via DOI: 10.3390/md6020117
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Research
principal investigator on
- Rapid, in-plant veterinary drug screening in animal carcasses using electrochemical aptamer-based sensors awarded by National Institute of Food & Agriculture 2020 - 2025
- US-Netherlands/Germany Collaborative Research: Development of 13C-Based Magnetic Resonance Spectroscopy and Imaging Techniques for the Zebrafish (Danio rerio) as a Toxicological Model, and Application to Harmful Algal Bloom Toxins awarded by National Science Foundation 2014 - 2016
- Transgenic zebrafish as biomarkers for detection of toxins in oceanic and fresh waters awarded by National Oceanic and Atmospheric Admin 2009 - 2013
- Zebrafish Embryos as a Model for Cyanobacterial Toxins. awarded by Environmental Health Sciences 2006 - 2009
- The Cyanobacterial Toxin, Microcystin, in the Food-Web of Lago Patzcuaro, Mexico. awarded by FIU Foundation 2008 - 2009
- Bioconcentration of Microcystin in the Bay of Quinte Food-Web. awarded by University of Waterloo 2006 - 2008
co-principal investigator on
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Grant
- Selection for strains of Saccharomyces cerevisiae with enhanced Ochratoxin-A detoxification capabilities awarded by National Institute of Food & Agriculture 2014 - 2018
- Advanced Research Cooperation in Environmental Health (ARCH)/Admin Supplement awarded by Environmental Health Sciences 2011 - 2012
- Advanced Research Cooperation in Environmental Health Research awarded by Environmental Health Sciences 2010 - 2012
- Advanced Research Cooperation in Environmental Health Research awarded by Environmental Health Sciences 2009 - 2010
subproject principal investigator on
investigator on
Contact
full name
- John Berry
