GPUDePiCt: A Parallel Implementation of a Clustering Algorithm for Computing Degenerate Primers on Graphics Processing Units Article

Cickovski, Trevor, Flor, Tiffany, Irving-Sachs, Galen et al. (2015). GPUDePiCt: A Parallel Implementation of a Clustering Algorithm for Computing Degenerate Primers on Graphics Processing Units . IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 12(2), 445-454. 10.1109/TCBB.2014.2355231

cited authors

  • Cickovski, Trevor; Flor, Tiffany; Irving-Sachs, Galen; Novikov, Philip; Parda, James; Narasimhan, Giri

sustainable development goals

authors

publication date

  • March 1, 2015

webpage

published in

keywords

  • ALIGNMENT
  • Biochemical Research Methods
  • Biochemistry & Molecular Biology
  • Computer Science
  • Computer Science, Interdisciplinary Applications
  • Graphics Processing Units (GPUs)
  • Life Sciences & Biomedicine
  • Mathematics
  • Mathematics, Interdisciplinary Applications
  • Physical Sciences
  • Science & Technology
  • Statistics & Probability
  • Technology
  • degenerate primer
  • genome
  • parallelism
  • shared memory

Digital Object Identifier (DOI)

publisher

  • IEEE COMPUTER SOC

start page

  • 445

end page

  • 454

volume

  • 12

issue

  • 2